Attia, T., Hussein, S., Hassab-Allah, M., Rashad, M., Fouda, E., Al Attar, M., Shaaban, H., Hamed, D., Saleh, A., Elnady, H., Abdel Baky, A., Ibrahim, H., Kotby, A., Soliman, N., Magdy, S., Sarhan, D. (2025). Current COVID-19 situation in children: 2025 statement. Afro-Egyptian Journal of Infectious and Endemic Diseases, 15(2), 217-225. doi: 10.21608/aeji.2025.372531.1463
Tarek Hamed Attia; Shahenaz Mahmoud Hussein; Magda Hassab-Allah; Mohamed Mahmoud Rashad; Eman Fouda; Mona Mohsen Al Attar; Hala Hamdi Shaaban; Dina Hossam El Dine Hamed; Aya Samir Saleh; Hala Elnady; Ashraf Abdel Baky; Hanan M Ibrahim; Alyaa Kotby; Nanies Soliman; Sondos M Magdy; Dina Tawfeek Sarhan. "Current COVID-19 situation in children: 2025 statement". Afro-Egyptian Journal of Infectious and Endemic Diseases, 15, 2, 2025, 217-225. doi: 10.21608/aeji.2025.372531.1463
Attia, T., Hussein, S., Hassab-Allah, M., Rashad, M., Fouda, E., Al Attar, M., Shaaban, H., Hamed, D., Saleh, A., Elnady, H., Abdel Baky, A., Ibrahim, H., Kotby, A., Soliman, N., Magdy, S., Sarhan, D. (2025). 'Current COVID-19 situation in children: 2025 statement', Afro-Egyptian Journal of Infectious and Endemic Diseases, 15(2), pp. 217-225. doi: 10.21608/aeji.2025.372531.1463
Attia, T., Hussein, S., Hassab-Allah, M., Rashad, M., Fouda, E., Al Attar, M., Shaaban, H., Hamed, D., Saleh, A., Elnady, H., Abdel Baky, A., Ibrahim, H., Kotby, A., Soliman, N., Magdy, S., Sarhan, D. Current COVID-19 situation in children: 2025 statement. Afro-Egyptian Journal of Infectious and Endemic Diseases, 2025; 15(2): 217-225. doi: 10.21608/aeji.2025.372531.1463
Current COVID-19 situation in children: 2025 statement
1Pediatrics Department, Faculty of Medicine, Zagazig University, Egypt
2Pediatric Department, Faculty of Medicine, Al-Azhar University, Cairo, Egypt
3Pediatric Department, Faculty of Medicine - girls, Cairo, Al-Azhar university, Egypt
4Pediatric Department, Faculty of Medicine, Benha University, Egypt
5Pediatrics Department, Faculty of Medicine, Ain Shams University, Egypt
6Pediatric Department, Faculty of Medicine, Cairo University, Egypt
7Child Health Department,National Research Center. Egypt
8Pediatric Department, Ain Shams University, Egypt; Head of Pediatrics Department, MTI University; Chair of Egyptian Pediatric Clinical Practice Guidelines Committee
9Pediatric Department, Cardiology Division, Faculty of Medicine, Ain Shams University, Egypt.
Abstract
COVID-19 virus as pandemic threat is finished, but the virus mutations are still considered as health hazard. The original virus and some of its mutations disappeared from the environment, but the current prevalent mutation is ECX strain. In this statement we are describing the epidemiology of the current strain, clinical presentation, methods of investigations and management specially in children.
By May 2023, WHO declared that COVID-19 was no longer a public health emergency of international concern. The SARS-CoV-2 virus that causes the COVID-19 pandemic, change over time. Most changes have some effect on the virus behavior. Some changes may affect the virus's properties, such as how easily it spreads, the resulting disease severity, the effect of vaccines, response to medications, diagnostic tests, or other social and public health measures. [1]
WHO continues to monitor SARS-CoV-2 variants, to track changes in viral characteristics and prevalence. The limitations of current COVID-19 surveillance include differences in sequencing and sampling strategies between countries, changes in sampling methods over time, decreasing number of performed tests and delays in sequencing results shared by countries. [2].
Epidemiology of the new COVID variant
By the end of 2024, WHO monitored seven SARS-CoV-2 variants, including two variants of interest (VOIs) BA.2.86 and JN.1, and seven variants under monitoring (VUMs). JN.1 is still the most reported variant globally, accounting for 12.2% of sequences in 41st week of the year. KP.3.1.1 and XEC (both VUMs) show rising prevalence, while all remaining VUMs are declining.
XEC is currently the only SARS-CoV-2 (VUM) with increasing prevalence globally. XEC was first reported in early August 2024 in Germany and a few other European countries but has since continued to spread, with cases identified in 27 countries across Europe, North America and Asia. [2] With significant rise in prevalence between epidemiological weeks 44 and 47, i.e. an increase from 14.3% to 35.6% for the Western Pacific region (WPR), from 37.0% to 48.0% for the European region (EUR), and from 22.7% to 32.8% for the region of the Americas (AMR). There are only four XEC sequences each from the African Region (AFR) and the East Mediterranean Region (EMR), and seventeen sequences from the Southeast Asia region as per WHO initial risk evaluation of XEC, 09 December 2024 [3]. Reports of new variants cases come mainly from countries that test more COVID samples through national surveillance programs. Higher numbers are expected in countries that don't routinely sequence COVID-19 samples.
XEC is considered a recombinant strain resulting when one individual is infected with two different strains of pre-existing COVID subvariants; the merger and rearrangement of Omicron sub lineages KP.3.3 (a descendant of the FL i RT variants) and KS.1.1 joins full segments of two genomes into one new genome. [4] (Figure 1).
CDC reported the latest mutations of SARS-CoV-2 — specifically KP.1, KP.2, KP.3, and their sub-lineages as the most infections in the United States in the first week of August 2024. [4-6]. As of January 11, 2025, Currently, the dominant variant nationwide is XEC, with 47% of cases, followed by LP.8.1, with 15% of cases, and KP.3.1.1, with 14% of cases. The original omicron variant is gone. [7] (Figure 2 (
Clinical Presentation
No reported studies comparing children and adolescents infected with SARS-CoV-2 to adults infected with the same variant, or even the difference between pediatric age groups. Generally speaking, children and adolescents mostly experience mild disease when infected with a SARS-CoV-2 VOC. [9].
Omicron and its subvariants have generally caused milder clinical severity of the disease than that caused by earlier strains in the pandemic, such as Alpha and Delta. The new strains differ in increased transmissibility which is considered a change in virus behavior and may be related to key differences in spike protein sequence that may reduce the effectiveness of some treatments or increase the virus's ability to spread [4], in addition to the waning immunity from previous vaccinations and infections may explain the recent previous summer COVID-19 surge.
According to the CDC, Symptoms may appear 2-14 days after exposure to the virus, may start as mild, and some people will progress to more severe symptoms.
The most common COVID symptoms haven't changed much since the start of the pandemic, they still include (but are not limited to) dry cough, fever or chills, dyspnea, diarrhea, nasal congestion or rhinorrhea and less frequent loss of taste or smell.
Symptoms also commonly include fatigue, muscle or body aches, and headache. The headaches caused by the coronavirus differ from "typical" headaches in that they tend to be longer in duration and more painful, and they may not respond to over-the-counter medications such as aspirin with more chance to develop neurological symptoms as part of the "long-term effects" of infection.
Hoarse voice and sore throat were among the top omicron variant symptoms. Although a runny nose and sneezing were previously considered unrelated to the coronavirus, they are now predominant symptoms with resultant cough from the post-nasal drip.
vaccinated people may experience more sinus and nasal symptoms of the coronavirus than non-vaccinated. Nasal congestion and sneezing may be more common with the omicron subvariant, like XEC than previous variants such as delta. That's because omicron variants tend to inhabit the upper respiratory tract—the nose, mouth, and throat—while former strains were more likely to migrate down the respiratory tract into the lungs.
Some patients may develop conjunctivitis or gastrointestinal symptoms like nausea, vomiting and diarrhea, constipation, abdominal pain and bloating but those symptoms are less common [10].
The biggest change is that affected cases can be asymptomatic or having milder symptoms overall. On the other hand, those at-risk patients are still getting seriously ill with COVID-19 and dying from the virus, they include those who are very young or very old, those who are immunocompromised, with underlying lung conditions or previous organ damage [11].
Immunity from previous infection can have a large protective role against Omicron sub-lineages in countries with low vaccination rates. However, the advantage of past infection may be demoted by emerging new antigenically different sub-lineages with more ability for immune elusion, especially with declining of immunity over time [12].
COVID-19 is considered mild when there are manifestations of upper respiratory tract involvement without evidence of pulmonary or other organs involvement. Moderate COVID-19 is lung involvement without hypoxia. Fortunately, most mild to moderate cases improve with supportive care [13].
Flu and COVID-19
It is not easy to make clinical differentiation between flu and COVID-19 because many of the signs and symptoms are similar ranging from being asymptomatic to severe disease [14]. Swab for influenza A & B may help in early differentiation. Main clinical differences are listed in table (1).
Prevention
The best way to prevent new variants is to slow the spread of the virus. The proven public health strategies used during 2020 pandemic continue to work against new variants as well. Choosing outdoor activities over indoor activities whenever possible, hand washing, keeping safe distance when contact with others, wearing a mask in public places and staying home when sick or having symptoms of COVID-19, in addition to the vaccine when indicated [5].
Diagnosis
New important concerns in diagnosis are three points
Molecular test (ideally nasopharyngeal or nasal swabs): It is the preferred test to detect viral RNA by PCR. it must include the current mutation sequences.
It provides the most sensitive and specific means of confirming a clinical diagnosis but, it is expensive; requires specialized skills and laboratories and the results can take longer than 24–48 hours to appear [15].
Assessment of the antibody response to SARS-CoV-2 should complement the RNA-based PCR tests and improve the understanding of the disease course, play a role in epidemiological studies and guide vaccine development [16].
Table (1): Main differences between Flu and COVID-19
Flu
COVID-19
Common shared symptoms
Common shared symptoms in COVID-19 and flu include: Fever , cough, shortness of breath, fatigue , sore throat, runny or stuffy nose, muscle pain, headache, vomiting
diarrhea (more frequent in children with flu, but can occur in any age with COVID-19)
change in or loss of taste or smell is more frequent with COVID-19
COVID-19 can cause more severe illness in some people
the incubation period
from one to four days after infection
from two to five days, and up to 14 days after infection
The contagious period
-children with flu are potentially contagious for about one day before they show symptoms, most contagious during the first three days of their illness,
-flu is spread mainly by people who are symptomatic with influenza
-people can begin spreading the virus that causes COVID-19 two to three days before their symptoms begin,
-or even when asymptomatic
Mode of spread
Both COVID-19 and flu can spread from person to person in similar ways mostly by inhalation of large and small droplets;
COVID-19 is more contagious than influenza viruses. Also, have more super-spreading events than flu.
Complications
Both COVID-19 and flu can result in complications, including: Pneumonia, Respiratory failure, acute respiratory distress syndrome, Sepsis, Cardiac injury, Multiple-organ failure, Secondary infections (bacterial or fungal infections).
Secondary bacterial infections are more common with influenza
-Multisystem Inflammatory Syndrome in children (MIS-C) may occur after COVID- 19 infection
-Long COVID
Approved treatments
Influenza antiviral drugs are FDA-approved to treat flu in high risk patients. These antiviral drugs are only for treatment of flu and not COVID-19
COVID-19 FDA has authorized several antiviral medications
Vaccine
There are multiple FDA-licensed influenza vaccines produced annually
Multiple COVID-19 vaccines are authorized or approved for use
The SARS-CoV-2 virus has numerous antigens, including its nucleocapsid protein, phosphoprotein, and spike protein. Immunoassays known as rapid antigen detection tests are used to detect SARS-CoV-2 viral protein (antigens) by lateral flow assays for nasopharyngeal or nasal swabs; (a low-priced technology that uses paper-based platforms to detect chemical analytes within short durations of time) [17].
Antigen testing has the advantages of being accessible diagnostic test, inexpensive, giving quick results, can be done outside of a laboratory and does not require an expert professional, it provides information of active infection with SARS-CoV-2 and can be repeated when required. Rapid antigen tests can help reduce further transmission through early detection of highly infectious cases, enabling a rapid start of contact tracing.
Although it is highly specific, it is not as sensitive as molecular tests. Compared to RT-PCR, it is less sensitive at low viral loads (i.e., antigen tests are not ideal for detecting infection at either early, asymptomatic or recovery stages of infection). False positive results can occur when used for testing populations with low prevalence of infection [18].
Antibodies to nucleocapsid antigen is more specific and sensitive than the former used anti spike protein especially in previously vaccinated cases. These antibodies can be detected by serological diagnostic tests using ELISA [19], immunofluorescence [20] and even a lateral flow test [21].
Antibody test are used to establish a late or retrospective diagnosis; they can provide results in 15–20 min if a rapid antibody test or within 24 h if a laboratory-based assay. Antibody tests can be non-specific and cause false-positive results; can be difficult to determine if seropositivity is vaccine-induced or natural. [15].
This is summarized in figure 3.
Other investigations:
Following the global spread of the COVID-19 pandemic and early throughout the pandemic, elevated levels of ferritin in patients with COVID-19 brought the attention of medical staff treating huge numbers of patients as well as researchers by predicting poor outcomes. The possible correlation between ferritin and worse prognosis necessitated further investigation. Subsequently, ferritin levels progressed from a prognostic point of view, to serve as a severity risk factor. More importantly, the dramatic increase in ferritin levels, in addition to lymphopenia, reduced NK cell number and activity, abnormal liver function tests, and coagulopathy, had researchers hypothesizing, and later indicated that COVID-19 might be the newest member in the group of hyperferritinemia syndrome [22].
Treatment
Supportive
Supportive care remains the cornerstone of COVID-19 management. For mild to moderate cases, this approach may suffice, focusing on monitoring and symptomatic relief of fever, good balanced diet and hydration as well as good follow up for any deterioration which may need hospital admission. In moderate to severe cases vital signs monitoring, in addition to the care of hydration state and nutrition is valuable. Intensive care support, including oxygen therapy and other ICU care, may be necessary to stabilize body function in severe and critical cases. Antibiotics are not recommended except if bacterial pneumonia/sepsis is strongly suspected.
COVID 19 antivirals:
Antiviral drugs are indicated in all cases of moderate to critical severity as well as in mild cases with risk factors. Children with comorbid conditions are at higher risk for severe or critical COVID-19.
During the early phase of the infection, when viral load is high and the host's adaptive immune system has not mounted an adequate response, treatments targeting viral replication are most likely to be effective. These include both the direct antiviral therapies nirmatrelvir/ritonavir, molnupiravir, and remdesivir; and the passive immunity therapies of anti-SARS-CoV-2 antibodies and donor convalescent plasma.
Later with disease progress, in patients with severe and especially critical disease (stage of hyper-immune state), the role of the antiviral drugs decline and the role of anti-inflammatory, immune-modulators and supportive drugs increases [13].
Remdesivir
It is metabolized to its active metabolite, remdesivir triphosphate, which is a structural analog of adenosine triphosphate and results in delayed chain termination during viral replication. It reduces early-stage COVID-19 mortality and the need for mechanical ventilation among hospitalized COVID-19 patients. Remdesivir is indicated for all ages.
Among patients with mild-to-moderate COVID-19 at high risk for progression to severe disease, the Infectious Disease Society of America (IDSA) guideline panel recommends initiating remdesivir within seven days of symptom onset[13].
Pediatric dosing
5mg/kg IV load on day 1 and 2.5 mg/kg q24h on subsequent two days. ▪
In patients on supplemental oxygen but not on mechanical ventilation or ECMO, treatment with five days of remdesivir rather than 10 days is indicated.
It is contraindicated in multi-organ failure, pressor requirement to maintain blood pressure, ALT levels > 5 times the upper normal value, Creatinine Clearance
Nirmatrelvir/Ritonavir (Paxlovid)
Paxlovid is an effective antiviral drug that reduces the risk of hospitalization and death against COVID-19, including cases caused by the Omicron variant.
Paxlovid contains nirmatrelvir tablets and ritonavir packaged together.
It has Emergency Use Authorization (EUA) to treat patients 12 to 18 years old for mild-to-moderate COVID-19 who are at high risk for progression to severe COVID-19, including hospitalization. Paxlovid is not approved for use as a pre-exposure or post-exposure prophylaxis to prevent COVID-19 or for the prevention of long COVID [23].
In ambulatory patients with mild-to-moderate COVID-19 at high risk for progression to severe disease, the IDSA guideline panel suggests nirmatrelvir/ritonavir initiated within five days of symptom onset [13].
▪ Dosing according to renal function:
Estimated glomerular filtration rate (eGFR) > 60 ml/min: 300 mg nirmatrelvir/100 ritonavir every 12 hours for five days
eGFR ≤60 mL/min and ≥30 mL/min: 150 mg nirmatrelvir/100 mg ritonavir every 12 hours for five days.
Conclusion
The COVID-19 virus as pandemic threat is finished, but the virus mutations are still considered as health hazard. The original virus and some of its mutations disappeared from the environment, but the current prevalent mutation is XEC strain. Clinical presentation of the current strain affects either or both respiratory and GI systems.
Finally, are we ready for the next pandemic and what do we learn from COVID?
Lesson 1: Prepare for the worst: "A pandemic is a lot like a forest fire. If caught early it might be extinguished with limited damage. If allowed to smolder, undetected, it can grow to an inferno that can spread quickly beyond our ability to control it."
Lesson 2: Deliver information, not reassurance. When it comes to a health threat, placating the public isn't the right strategy.
Lesson 3: Get ahead of misinformation, as it eroded millions of people's trust in public health
Author contribution: We declare that all listed authors have made substantial contributions to all of the following three parts of the manuscript:
- Collection and interpretation of data;
- drafting the paper or revising it critically;
- approving the submitted version.
D.T.S designed the algorithm.
We also declare that no-one who qualifies for authorship has been excluded from the list of authors.
Funding
None.
Conflict of interest
None
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